Correlated mutations:

  • Valencia (CNB-CSIC, Madrid))
  • Kass and Horovitz (Weizmann)
  • CorrMut (TAU)
  • CorrMut (Tutorial, distribution)
  • RECON (Clemson)
  • CRASP (Novosibirsk)
  • Java implementation (by A.A. Fodor) of several methods (including SCA of Ranganathan et al.)

    • Contact predictions:

  • CORNET (based on Valencia and Casadio, Italy)
  • PROFcon CUBIC, Columbia University
  • Hamilton (Aus)
  • HMM-based Protein Structure Prediction, SAM-T06 (UCSC)
  • GPCPRED (Stockholm)
  • CMAPpro (University of California-Irvine)
  • Eva - evaluation of structure predictions
    •